A quick note to support a recent Twitter thread https://twitter.com/rdmpage/status/1729816558866718796?s=61&t=nM4XCRsGtE7RLYW3MyIpMA The article “Diversification of flowering plants in space and time” by Dimitrov et al. describes a genus-level phylogeny for 14,244 flowering plant genera. This is a major achievement, and yet neither the tree nor the data supporting that tree are readily available.
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How I solved data integration performance problems by rewriting SPARQL queries or changing the approach. Food for thought that might help you too!
Shortly following an update earlier this week, the Rogue Scholar science blog archive has updated or added two features today: better documentation and new comments.Documentation The Rogue Scholar documentation site was launched with the service but hasn't seen any updates in several months. Today I updated the platforms page, explaining what blogging platforms are used by the blogs participating in Rogue Scholar and how they are integrated.
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The Rogue Scholar science blog archive launched two new features today: GUIDs (globally unique identifiers) and support for OECD Fields of Science and Technology. Globally unique identifiers (GUIDs) GUIDs are used to globally identify a blog post and are part of the RSS, Atom, and JSON Feed specifications.
In the spirit of “if it took you a while to find out how to do something, write about it”, I will detail a method to approximate the surface area of a 3D shape. Our application here was finding the surface area of a cell but it can be used on any shape. We start with a 3D point set, specified by points of interest in a single cell imaged by 3D confocal microscopy.
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Abstract / TLDR R-universe now builds WASM binaries of all R packages for use in WebR applications (such as shinylive). For example to test the dev version of dplyr, you can open the WebR demo page and run:install.packages('dplyr', repos = c('https://tidyverse.r-universe.dev', 'https://repo.r-wasm.org')) As explained below, not all R packages are supported yet;
In the winding world of academic research, the quest for an appropriate repository to store and share scholarly data has been akin to a modern-day odyssey. Traditionally, this journey involved wading through static pages and search indexes, a process both time-consuming and fraught with uncertainty.