Messages de Rogue Scholar

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I’ve raved about the value of extending a personalized welcome to new community members and I recently shared six tips for running a successful hackathon-flavoured unconference. Building on these, I’d like to share the specific approach and (free!) tools I used to help prepare new rOpenSci community members to be productive at our unconference.

Publié in rOpenSci - open tools for open science
Auteurs Anikó B. Tóth, Nick Golding

Are you new to version control and always running into trouble with Git?Or are you a seasoned user, haunted by the traumas of learning Git and reliving them whilst trying to teach it to others?Yeah, us too. Git is a version control tool designed for software development, and it is extraordinarily powerful.

Publié in rOpenSci - open tools for open science
Auteurs Holly Kirk, Di Cook, Alicia Allan, Ross Gayler, Roger Peng, Elle Saber

The second rOpenSci OzUnConf was held in Melbourne Australia a few weeks ago. A diverse range of scientists, developers and general good-eggs came together to make some R-magic happen and also learn a lot along the way. Before the conference began, a huge stack of projects were suggested on the unconf GitHub repo. For six data-visualisation enthusiasts, one issue in particular caught their eye, and the ochRe package was born.

Publié in Europe PMC News Blog
Auteur Europe PMC Team

[We are excited to announce the launch of Europe PMC Annotations API, which provides programmatic access to annotations text-mined from biomedical abstracts and open access full text articles. The Annotations API is a part of Europe PMC’s programmatic tools suit and is freely available on the Europe PMC website: ]{style=“font-family: "arial"; font-size: 11pt;

Publié in rOpenSci - open tools for open science
Auteur Jonathan Carroll

This year’s rOpenSci ozunconf was held in Melbourne, bringing together over 45 R enthusiasts from around the country and beyond. As is customary, ideas for projects were discussed in GitHub Issues (41 of them by the time the unconf rolled around!) and there was no shortage of enthusiasm, interesting concepts, and varied experience.

Publié in rOpenSci - open tools for open science
Auteur Kelly O'Briant

KO: What is your name, job title, and how long have you been using R? [Note: This interview took place in May 2017. Mara joined RStudio as their tidyverse developer advocate in November 2017.] MA: My name is Mara Averick, I do consulting, data science, I just say “data nerd at large” because I’ve seen those Venn diagrams and I’m definitely not a data scientist. I used R in high school for fantasy basketball.

Publié in rOpenSci - open tools for open science
Auteur Nicholas Tierney

Just last week we organised the 2nd rOpenSci ozunconference, the sibling rOpenSci unconference, held in Australia. Last year it was held in Brisbane, this time around, the ozunconf was hosted in Melbourne, from October 26-27, 2017. At the ozunconf, we brought together 45 R-software users and developers, scientists, and open data enthusiasts from academia, industry, government, and non-profits.

Publié in rOpenSci - open tools for open science
Auteur Mark Padgham

A new rOpenSci package provides access to data to which users may already have directly contributed, and for which contribution is fun, keeps you fit, and helps make the world a better place. The data come from using public bicycle hire schemes, and the package is called bikedata.

Publié in rOpenSci - open tools for open science
Auteur Kelly O'Briant

KO: What is your name, job title, and how long have you been using R? DS: My name is David Smith. I work at Microsoft and my self-imposed title is ‘R Community Lead’. I’ve been working with R specifically for about 10 years, but I’d been working with S since the early 90s. KO: How did you transition into using R? DS: I was using S for a long, long time, and I worked for the company that commercialized S, where I was a project manager for S-PLUS.