Messages de Rogue Scholar

language

In my training as a AAAS Community Engagement Fellow, I hear repeatedly about the value of extending a personal welcome to your community members. This seems intuitive, but recently I put this to the test. Let me tell you about my experience creating and maintaining a #welcome channel in a community Slack group.

Publié in rOpenSci - open tools for open science
Auteurs Eduardo Arino de la Rubia, Shannon E. Ellis, Julia Stewart Lowndes, Hope McLeod, Amelia McNamara, Michael Quinn, Elin Waring, Hao Zhu

Like every R user who uses summary statistics (so, everyone), our team has to rely on some combination of summary functions beyond summary() and str(). But we found them all lacking in some way because they can be generic, they don’t always provide easy-to-operate-on data structures, and they are not pipeable. What we wanted was a frictionless approach for quickly skimming useful and tidy summary statistics as part of a pipeline.

Publié in rOpenSci - open tools for open science
Auteurs Alicia Schep, Miles McBain

We, Alicia Schep and MilesMcBain, drove the webrockets projectat #runconf17.To make progress we solicited code, advice, and entertaining anecdotesfrom a host of other attendees, whom we humbly thank for helping to makeour project possible. This post is divided into two sections: First up we’ll relate ourexperiences, prompted by some questions we wrote forone another.

Publié in iPhylo

Nico Franz and Beckett W. Sterner recently published a preprint entitled "To Increase Trust, Change the Social Design Behind Aggregated Biodiversity Data" on bioRxiv http://dx.doi.org/10.1101/157214 Below is the abstract: Below I respond to some specific points that annoyed me about this article, at the end I try and sketch out a more constructive response.

Auteurs Stefanie Butland, Karthik Ram, Dan Sholler

We are pleased to welcome our Postdoctoral Fellow, Dr. Dan Sholler. Dan is an expert in qualitative research (yes, you read that correctly) and studies digital infrastructure creation, growth, and maintenance efforts. Through this research interest, he was drawn to the open science community and its ongoing development of tools and communities to support sustainable, reproducible, high-quality research.

Auteurs Becca Krouse, Erin Grand, Hannah Frick, Lori Shepherd, Sam Firke, William Ampeh

Before everybody made their way to the unconf via LAX and Lyft, attendees discussed potential project ideas online. The packagemetrics package was our answer to two related issues. The first proposal centered on creating and formatting tables in a reproducible workflow.

Auteur Shannon E. Ellis

What’s that? You’ve heard of R? You use R? You develop in R? You know someone else who’s mentioned R? Oh, you’re breathing? Well, in that case, welcome! Come join the R community! We recently had a group discussion at rOpenSci’s #runconf17 in Los Angeles, CA about the R community. I initially opened the issue on GitHub.

Auteurs Noam Ross, Alice Daish, Laura DeCicco, Molly Lewis, Nistara Randhawa, Jennifer Thompson, Nicholas Tierney

Two years ago at #runconf15, there was a great discussion about best practices for organizing R-based analysis projects that yielded a nice guidance document describing research compendia . Compendia, as we described them, were minimal products of reproducible research, using parts of R package structure to organize the inputs, analyses, and outputs of research projects.

Auteur Karthik Ram

And finally, we end our series of unconf project summaries (day 1, day 2, day 3, day 4).mwparser Summary: Wikimarkup is the language used on Wikipedia and similar projects, and as such contains a lot of valuable data both for scientists studying collaborative systems and people studying things documented on or in Wikipedia.

Auteur Scott Chamberlain

Continuing our series of blog posts (day 1, day 2, day 3) this week about unconf 17.cityquant Summary: The goal with the cityquant project was to build a digital dashboard for sustainable cities. They also had a “spin-off” project called selfquant to get data from a quantified self google sheets template to keep track of weekly performance in various categories.