Messages de Rogue Scholar

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Auteur Daniel Münch

Olfactory Coding Detecting volatile chemicals and encoding these into neuronal activity is a vital task for all animals that is performed by their olfactory sensory systems. While these olfactory systems vary vastly between species regarding their numerical complexity, they are amazingly similar in their general structure.

Auteurs Noam Ross, Maëlle Salmon, Karthik Ram, Scott Chamberlain

At rOpenSci, our R package peer review process relies on the the hard work of many volunteer reviewers. These community members donate their time and expertise to improving the quality of rOpenSci packages and helping drive best practices into scientific software. Our open review process, where reviews and reviewers are public, means that one benefit for reviewers is that they can get credit for their reviews.

Auteur Charles T. Gray

To give you an idea of where I am in my R developer germination, I’d just started reading about testing when I received an email from @rOpenSci inviting me to review the weathercan package. Many of us in the R community feel like imposters when it comes to software development. In fact, as a statistician, it was a surprise to me when I was recently called a developer.

Publié in rOpenSci - open tools for open science

The drake R package is a pipeline toolkit. It manages data science workflows, saves time, and adds more confidence to reproducibility. I hope it will impact the landscapes of reproducible research and high-performance computing, but I originally created it for different reasons. This post is the prequel to drake’s inception. There was struggle, and drake was the answer.Dissertation frustration My dissertation project was intense.

Publié in rOpenSci - open tools for open science
Auteur Sam Albers

One of the best things about learning R is that no matter your skill level, there is always someone who can benefit from your experience. Topics in R ranging from complicated machine learning approaches to calculating a mean all find their relevant audiences. This is particularly true when writing R packages.

Publié in rOpenSci - open tools for open science
Auteurs Maëlle Salmon, Noam Ross, Scott Chamberlain, Karthik Ram

rOpenSci is pleased to announce a new collaboration with the Methods in Ecology and Evolution (MEE), a journal of the British Ecological Society, published by Wiley press 1 . Publications destined for MEE that include the development of a scientific R package will now have the option of a joint review process whereby the R package is reviewed by rOpenSci, followed by fast-tracked review of the manuscript by MEE.

Publié in rOpenSci - open tools for open science
Auteur Mark Padgham

A new rOpenSci package provides access to data to which users may already have directly contributed, and for which contribution is fun, keeps you fit, and helps make the world a better place. The data come from using public bicycle hire schemes, and the package is called bikedata.

Publié in rOpenSci - open tools for open science
Auteur Tim Trice

What is rrricanes Why Write rrricanes? There is a tremendous amount of weather data available on the internet. Much of it is in raw format and not very easy to obtain. Hurricane data is no different. When one thinks of this data they may be inclined to think it is a bunch of map coordinates with some wind values and not much else. A deeper look will reveal structural and forecast data.

Publié in rOpenSci - open tools for open science
Auteurs Scott Chamberlain, Maëlle Salmon, Noam Ross, Karthik Ram

The R package ecosystem now contains more than 10K packages, and several flagship packages belong under the rOpenSci suite. Some of these are: magick for image manipulation, plotly for interactive plots, and git2r for interacting with git. rOpenSci is a community of people making software to facilitate open and reproducible science/research.