From how we do science to publishing practices to the sociology of science, there isn’t an aspect of the scientific endeavor that isn’t in flux right now.
From how we do science to publishing practices to the sociology of science, there isn’t an aspect of the scientific endeavor that isn’t in flux right now.
At Disney World infancy ends at 3, or at least that is the age children have to start purchasing tickets. It seemed appropriate to celebrate our 4th birthday there. Or at least at the #ISMB16 Computational Biology meeting that was held this week at the Walt Disney World Resort.
The first, throat clearing post to kick off what (we hope) will be a revitalization of the Portal Project Blog
[Update: A little bird pointed out I didn’t have a link to the actual Portal blog. That has been remedied along with a link to the Portal Project website for those who’d like more info on the project] A couple weeks ago, I posted about the new data paper from my long-term field site, the Portal Project.
Join the Open Data club. Every year we catch up with fellow enthusiasts of open data, open source and open science at BOSC, the Bioinformatics Open Source Conference that is a Special Interest Group of the ISCB’s annual ISMB conference. This year there is an interesting juxtaposition with the location, being held at the Disney World resort in Orlando.
**Shallow Impact. Tis the season. **In case people didn’t know— the world of scientific publishing has seasons: There is the Inundation season, which starts in November as authors rush to submit their papers before the end of year. Then there is the Recovery season beginning in January as editors come back from holidays to tackle the glut.
This is the story behind “Comparing process-based and constraint-based approaches for modeling macroecological patterns” by my former PhD student Xiao Xiao, James O’Dwyer, and myself. Background I was on sabbatical in the fall of 2013 and was doing a lot of reading, and I reread “An integrative framework for stochastic, size-structured community assembly” by James O’Dwyer, Jessica Green, and colleagues.
Teams of scientists from Spain have published the first complete genome of the olive tree. The specimen sequenced is of the Spanish Farga variety, and is over 1,200 years old.
It is with great glee that I can announce the latest release of the Portal Project Database. For those of you who just want to go play with the data – here’s the link to the Data Paper we just published in Ecology. But I would encourage you to read on, as there is more data-related news below. But first, a story. As some of you know, I manage a long-term ecological study: the Portal Project.
Following our announcement this month of a new collaboration and integration with protocols.io, we’ve gone into more detail on the first two papers that have utilised this open access repository of scientific methods and collaborative protocol-centered platform.