Pimp my JavaDoc
Jörg's PhD book Data Mining und Graph Mining auf molekularen Graphen - Chemoinformatik und
molekulare Kodierungen für ADME/Tox-QSAR-Analysen has a dump of the JavaDoc of the GroupContributionPredictor in
JOELib (Figure 3.2, page 43). There are two nice things to the shown JavaDoc: 1. it has links to
Wikipedia; 2. it has a Further Reading section.
Now, the CDK already links to a bibliography for some time now. However, it would just give a BibTex
key, and link to a webpage created from a BibTeXML file in which we store all references
(cdk/doc/refs/cheminf.bibx).
Putting the full citation inline makes the JavaDoc more informative, but I wanted to preserve the @cdk.cite
mechanism we were using.
This weekend I hacked up a nice CDKCiteDoclet that would read the BibTeXML file with XOM, and convert items to HTML to put into the pimped JavaDoc:

Additional details
Description
Jörg's PhD book Data Mining und Graph Mining auf molekularen Graphen - Chemoinformatik und molekulare Kodierungen für ADME/Tox-QSAR-Analysen has a dump of the JavaDoc of the GroupContributionPredictor in JOELib (Figure 3.2, page 43). There are two nice things to the shown JavaDoc: 1. it has links to Wikipedia; 2. it has a Further Reading section.
Identifiers
- GUID
- https://doi.org/10.59350/bpnj5-40e86
- URL
- https://chem-bla-ics.linkedchemistry.info/2007/02/19/pimp-my-javadoc.html
Dates
- Issued
-
2007-02-19T01:00:00
- Updated
-
2025-02-15T01:00:00