chem-bla-ics
Published August 14, 2008 | https://doi.org/10.59350/9xesf-et382

Profiling the CDK atom typer

Creators & Contributors

  • 1. ROR icon Wageningen University & Research

I was doing some profiling (YourKit and Eclipse3.4) of the CDK atom typer, and it turns out that most time is spend on the perception of nitrogen atom types, which seems to be caused by the loadClassInternal() method of the JVM (java-1.5.0-sun-1.5.0.16 on Ubuntu Hardy):

Additional details

Description

I was doing some profiling (YourKit and Eclipse3.4) of the CDK atom typer, and it turns out that most time is spend on the perception of nitrogen atom types, which seems to be caused by the loadClassInternal() method of the JVM (java-1.5.0-sun-1.5.0.16 on Ubuntu Hardy):

Identifiers

GUID
https://doi.org/10.59350/9xesf-et382
URL
https://chem-bla-ics.linkedchemistry.info/2008/08/14/profiling-cdk-atom-typer.html

Dates

Issued
2008-08-14T02:00:00
Updated
2008-08-14T02:00:00